Was able to repair the controller and put the bike back together for a trail ride before dark. Today was exceptionally warm for this time of year. I only wore a long sleeve t-shirt while riding. The bike is running good again. Fell asleep later in the evening from the workout. Really tried to make the 10amp pack last. Now I'm up an can't sleep. Here are pictures I took of the repairs I did.
The controller was removed and part was unsoldered. You can see the transistor in the middle of the board.

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I decided not to keep the original design since it would of burnt out again at 48volts. I was able to modify a board I did for my RC stuff years ago. Shorting out the first stage of the current section gave me a circuit similar to the circuits found on a lot of controllers using a resistor as a voltage drop and an LM317 to bring the voltage down. I chose aprox. 18volts for the first stage, giving the controller's LM7815 a voltage level it could work with.

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I ended up mounting it to the side of the box. I had to isolate the LM317 from the case by using a plastic sleeve and mica backing.

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For those running 48volts on this 24volt controller will eventually run into this problem. I have extra blank PCB boards available if you need them. $5 shipped. They are good for other low current applications as well.

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During the teardown, thought it would be a good time to see how the Nuvinci drive would fit. Looks like I will have to mill out the plate since it interferes with the rear derailleur. Not quite plug and play.

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I also notice the motor having a slight offset. Took it down as well and discovered some damage to the frame. This is what happens when you start bashing into logs. Oh well, have to make a conscience effort to avoid the steeper ones. The mounting setup could of been better as well. It was designed around the first frame that broke on me. I might have to redo this part of it but for now I used a conduit pipe cut down the center and place over the damaged area. Hopefully it will give a bit more support against being crushed.

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